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  5. Tin_g15398

Tin_g15398


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15398

Target Alias Description ECC score Gene Family Method Actions
Adi_g003782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g080041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038800.1 Ceric.23G038800 not classified & original description: pacid=50609666... 0.04 OrthoFinder output from all 47 species
Ceric.37G013900.1 Ceric.37G013900 not classified & original description: pacid=50615693... 0.06 OrthoFinder output from all 47 species
Dac_g11372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15209 FRL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24860 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os07g40270.1 LOC_Os07g40270 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g07380.1 LOC_Os09g07380 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g00652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27931 No alias stabilizing component *(FRL1) of FRI-C transcription... 0.05 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g02468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g19358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009308_P001 Zm00001e009308 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 152 446
No external refs found!