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  5. Tin_g15384

Tin_g15384 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0016747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016747_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15384

Target Alias Description ECC score Gene Family Method Actions
Ala_g07328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z028600.1 Ceric.1Z028600 not classified & original description: pacid=50582133... 0.08 OrthoFinder output from all 47 species
Dac_g25042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 281 310
IPR002885 Pentatricopeptide_repeat 378 426
IPR002885 Pentatricopeptide_repeat 177 223
IPR002885 Pentatricopeptide_repeat 75 121
No external refs found!