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  5. Tin_g15362

Tin_g15362


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15362
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT2G32930 ZFN2 zinc finger nuclease 2 0.02 OrthoFinder output from all 47 species
AT5G63260 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene36780.t1 ZFN1, Aspi01Gene36780 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Gb_32584 ZFN1 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Lfl_g11561 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g03707 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g44845 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12708 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Solyc06g008740.3.1 Solyc06g008740 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 264 289
IPR000571 Znf_CCCH 309 333
IPR000571 Znf_CCCH 67 89
IPR000571 Znf_CCCH 109 134
IPR000571 Znf_CCCH 21 43
No external refs found!