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  5. Tin_g15245

Tin_g15245 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : not classified & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15245

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene01667.t3 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72840.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g32820.1 ATPDR5, PDR5,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Pp3c18_21520V3.1 PDR1, ATPDR1,... ABC-2 and Plant PDR ABC-type transporter family protein 0.01 OrthoFinder output from all 47 species
Smo99541 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1905037 autophagosome organization IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 13 101
No external refs found!