1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g15123

Tin_g15123


Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g15123

Target Alias Description ECC score Gene Family Method Actions
Adi_g017299 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020490 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cre08.g360600 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
MA_10551g0010 No alias Protein OSCA1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5743237g0010 RXW8 CSC1-like protein RXW8 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc06g084330.3.1 Solyc06g084330 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Solyc07g048110.4.1 Solyc07g048110 calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
Solyc09g064810.4.1 Solyc09g064810 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 205 367
IPR032880 Csc1/OSCA1-like_N 15 184
IPR003864 CSC1/OSCA1-like_7TM 378 649
No external refs found!