Tin_g14998


Description : component *(uS5c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0006947 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006947_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14998
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00027870 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT2G33800 No alias Ribosomal protein S5 family protein 0.12 OrthoFinder output from all 47 species
Aev_g08558 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ala_g09860 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Aob_g01160 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g08706 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Azfi_s0164.g054257 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g08130 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.31G051100.1 Ceric.31G051100 component *(uS5c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cre16.g659950 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dcu_g02392 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g01276 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Ehy_g02229 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01021083001 No alias Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Gb_10529 No alias component psRPS5 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
LOC_Os03g34040.1 LOC_Os03g34040 component psRPS5 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Lfl_g06469 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_10435489g0020 No alias component psRPS5 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp8g10330.1 No alias component psRPS5 of small ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Nbi_g03405 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g26045 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g26046 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g02168 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000229 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sam_g15053 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Solyc02g077990.3.1 Solyc02g077990 component psRPS5 of small ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Spa_g00297 No alias component *(uS5c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Zm00001e004331_P004 Zm00001e004331 component psRPS5 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 115 179
IPR005324 Ribosomal_S5_C 192 262
No external refs found!