1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g14838

Tin_g14838 (AGO1)


Aliases : AGO1

Description : miRNA recruiTing factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14838

Target Alias Description ECC score Gene Family Method Actions
Aob_g22649 AGO7, ZIP not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018054001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09020.1 AGO5, LOC_Os07g09020 Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Ppi_g02415 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Zm00001e030606_P001 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 726 802
IPR003165 Piwi 818 1137
IPR032472 ArgoL2 669 715
IPR032474 Argonaute_N 334 468
IPR003100 PAZ_dom 535 659
IPR014811 ArgoL1 478 528
No external refs found!