Tin_g14674


Description : not classified & original description: none


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14674

Target Alias Description ECC score Gene Family Method Actions
AT2G44920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g053093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16139 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.01G001200.1 Ceric.01G001200 not classified & original description: pacid=50590454... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001628.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g687300 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g27653 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Dde_g13753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g05080.1 LOC_Os01g05080 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Lfl_g24901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10232509g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.06 OrthoFinder output from all 47 species
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.06 OrthoFinder output from all 47 species
Mp7g06080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g04471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g14110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59221 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022678 No alias not classified & original description: CDS=682-1350 0.03 OrthoFinder output from all 47 species
Spa_g39405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025798_P001 Zm00001e025798 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 96 127
IPR001646 5peptide_repeat 130 169
No external refs found!