Description : RNA ediTing factor *(POCO) & original description: none
Gene families : OG0000613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000613_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00135p00094440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g09450,... | 0.04 | OrthoFinder output from all 47 species | |
AT1G02370 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G15590 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G01990 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G02820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G21705 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g016255 | No alias | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g059294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g30824 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07750 | No alias | RNA editing factor *(POCO) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g33654 | No alias | RNA editing factor *(POCO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0492.g073535 | No alias | not classified & original description: CDS=381-2006 | 0.05 | OrthoFinder output from all 47 species | |
Ceric.31G052700.1 | Ceric.31G052700 | RNA editing factor *(POCO) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g10643 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g24432 | No alias | RNA editing factor *(POCO) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g03895 | No alias | RNA editing factor *(POCO) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01002065001 | No alias | Pentatricopeptide repeat-containing protein At4g21705,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020533001 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031246001 | No alias | Pentatricopeptide repeat-containing protein At4g01990,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033642001 | No alias | Pentatricopeptide repeat-containing protein At1g80270,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_09452 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.06 | OrthoFinder output from all 47 species | |
Gb_20238 | No alias | RNA editing factor (POCO) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g19490.1 | LOC_Os01g19490 | Pentatricopeptide repeat-containing protein At4g01990,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g55310.1 | LOC_Os02g55310 | Pentatricopeptide repeat-containing protein At5g27460... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g25410.1 | LOC_Os04g25410 | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g40750.1 | LOC_Os07g40750 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g35730.1 | LOC_Os10g35730 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g35760.2 | LOC_Os10g35760 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os12g34340.1 | LOC_Os12g34340 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.03 | OrthoFinder output from all 47 species | |
MA_100637g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_10431989g0010 | No alias | RNA editing factor (POCO) | 0.06 | OrthoFinder output from all 47 species | |
MA_10435629g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_170161g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.03 | OrthoFinder output from all 47 species | |
MA_7558g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_94340g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.02 | OrthoFinder output from all 47 species | |
MA_9997953g0010 | No alias | Pentatricopeptide repeat-containing protein At1g60770... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g079320.4.1 | Solyc01g079320 | Pentatricopeptide repeat-containing protein At1g02370,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g081320.4.1 | Solyc01g081320 | Pentatricopeptide repeat-containing protein At5g27460... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g089870.3.1 | Solyc01g089870 | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g078330.3.1 | Solyc02g078330 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g071900.3.1 | Solyc06g071900 | Pentatricopeptide repeat-containing protein At1g07590,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g054090.3.1 | Solyc07g054090 | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g37476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007372_P001 | Zm00001e007372 | Pentatricopeptide repeat-containing protein At1g02150... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012594_P001 | Zm00001e012594 | Pentatricopeptide repeat-containing protein At4g21705,... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e039746_P002 | Zm00001e039746 | Pentatricopeptide repeat-containing protein At4g02820,... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
No external refs found! |