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  5. Tin_g14155

Tin_g14155


Description : RNA splicing regulator *(NSR) & original description: none


Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14155

Target Alias Description ECC score Gene Family Method Actions
Adi_g026535 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16459 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G015200.1 Ceric.09G015200 RNA splicing regulator *(NSR) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g16637 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31383 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07293 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10153 No alias RNA splicing regulator *(NSR) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g18279 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17439 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_29580V3.1 Pp3c6_29580 nucleotide binding;nucleic acid binding 0.02 OrthoFinder output from all 47 species
Sam_g08348 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24886 No alias RNA splicing regulator *(NSR) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024672_P001 Zm00001e024672 NSR RNA splicing regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 164 232
No external refs found!