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  5. Tin_g14035

Tin_g14035 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : ER luminal lecTin chaperone *(CRT) & original description: none


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14035
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00024290 AtCRT1a, CRT1a,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
AT1G56340 AtCRT1a, CRT1a, CRT1 calreticulin 1a 0.03 OrthoFinder output from all 47 species
Aev_g26121 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09257 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021500.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G039100.1 AtCRT1a, CRT1a,... ER luminal lectin chaperone *(CRT) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g18966 PIP5K9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g22860 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09791 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g39201 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07748 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g32686 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023613 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original... 0.04 OrthoFinder output from all 47 species
Sam_g26252 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50479 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033207_P002 AtCRT1a, CRT1a,... lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 59 294
IPR001580 Calret/calnex 296 369
No external refs found!