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  5. Tin_g13986

Tin_g13986 (UBP12)


Aliases : UBP12

Description : not classified & original description: none


Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13986

Target Alias Description ECC score Gene Family Method Actions
Adi_g107348 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06394 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29816 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23682.t2 UBP12, Aspi01Gene23682 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57571.t2 Aspi01Gene57571 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g010362 UBP12 not classified & original description: CDS=350-7828 0.05 OrthoFinder output from all 47 species
Cba_g11482 UBP13 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G071100.1 UBP12, Ceric.15G071100 not classified & original description: pacid=50640759... 0.05 OrthoFinder output from all 47 species
Dac_g27627 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23057 UBP12 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g12126 UBP12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18112 UBP12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35991 UBP12 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g11501 UBP12 not classified & original description: none 0.1 OrthoFinder output from all 47 species
MA_10436921g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_17762g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6934376g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7843052g0010 UBP13 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g43540 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g49066 UBP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740 UBP12 not classified & original description: CDS=294-7754 0.05 OrthoFinder output from all 47 species
Smo447032 UBP12 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Spa_g09112 UBP12 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 1593 1960
IPR021905 DUF3517 2152 2474
No external refs found!