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  5. Tin_g13974

Tin_g13974


Description : not classified & original description: none


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13974
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Ala_g04893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12777.t1 Aspi01Gene12777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0149.g023267 No alias not classified & original description: CDS=111-2933 0.02 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 727 753
IPR002885 Pentatricopeptide_repeat 831 860
IPR002885 Pentatricopeptide_repeat 483 511
IPR002885 Pentatricopeptide_repeat 969 1015
IPR033443 PPR_long 512 695
IPR002885 Pentatricopeptide_repeat 885 947
No external refs found!