Tin_g13971 (PUB14, ATPUB14)

Aliases : PUB14, ATPUB14

Description : not classified & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g13971

Target	Alias	Description	ECC score	Gene Family Method
Aop_g00484	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.26G012900.1	Ceric.26G012900	not classified & original description: pacid=50598948...	0.03	OrthoFinder output from all 47 species
Dac_g35977	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os02g49950.1	LOC_Os02g49950	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Len_g14041	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g20959	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g39545	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e018578_P001	Zm00001e018578	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	123	145

External Links

No external refs found!