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  5. Tin_g13860

Tin_g13860


Description : not classified & original description: none


Gene families : OG0012411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13860

Target Alias Description ECC score Gene Family Method Actions
Ala_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035676 No alias not classified & original description: CDS=1-2358 0.04 OrthoFinder output from all 47 species
Dac_g10436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 431 455
IPR002885 Pentatricopeptide_repeat 837 861
IPR002885 Pentatricopeptide_repeat 459 488
IPR002885 Pentatricopeptide_repeat 634 659
IPR002885 Pentatricopeptide_repeat 329 350
IPR002885 Pentatricopeptide_repeat 128 150
IPR002885 Pentatricopeptide_repeat 663 692
IPR046848 E_motif 880 919
IPR002885 Pentatricopeptide_repeat 255 301
IPR002885 Pentatricopeptide_repeat 356 403
IPR002885 Pentatricopeptide_repeat 153 202
No external refs found!