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  5. Tin_g13857

Tin_g13857


Description : not classified & original description: none


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13857

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0032.g024773 emb1417 not classified & original description: CDS=255-1061 0.03 OrthoFinder output from all 47 species
Dac_g31123 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031686001 No alias Pentatricopeptide repeat-containing protein At4g18975,... 0.04 OrthoFinder output from all 47 species
Ppi_g09009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 196
IPR002885 Pentatricopeptide_repeat 211 235
No external refs found!