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  5. Tin_g13447

Tin_g13447


Description : substrate adaptor *(RAE1) of SCF E3 ubiquiTin ligase complex & original description: none


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13447

Target Alias Description ECC score Gene Family Method Actions
Ala_g02386 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g06998 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g15173 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 127 150
IPR001611 Leu-rich_rpt 407 430
IPR001611 Leu-rich_rpt 457 479
IPR001611 Leu-rich_rpt 359 379
IPR001611 Leu-rich_rpt 559 581
IPR001611 Leu-rich_rpt 205 226
IPR001611 Leu-rich_rpt 481 505
IPR001611 Leu-rich_rpt 431 455
IPR001611 Leu-rich_rpt 254 277
No external refs found!