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  5. Tin_g13446

Tin_g13446


Description : substrate adaptor *(RAE1) of SCF E3 ubiquiTin ligase complex & original description: none


Gene families : OG0002069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13446

Target Alias Description ECC score Gene Family Method Actions
AT5G01720 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ehy_g01378 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Gb_24899 No alias F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g06723 No alias substrate adaptor *(RAE1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g21760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g076290.2.1 Solyc10g076290 F-box/LRR-repeat protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 90 111
IPR001611 Leu-rich_rpt 142 165
IPR001611 Leu-rich_rpt 576 598
IPR001611 Leu-rich_rpt 345 366
IPR001611 Leu-rich_rpt 422 445
IPR001611 Leu-rich_rpt 371 394
IPR001611 Leu-rich_rpt 220 241
IPR001611 Leu-rich_rpt 499 522
IPR001611 Leu-rich_rpt 168 189
IPR001611 Leu-rich_rpt 269 292
No external refs found!