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  5. Tin_g13421

Tin_g13421


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13421
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT3G28580 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
AT3G28600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G17760 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT5G40000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Aev_g08283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g55732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06431.t1 Aspi01Gene06431 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G070800.1 Ceric.19G070800 not classified & original description: pacid=50576389... 0.06 OrthoFinder output from all 47 species
Ceric.19G070900.1 Ceric.19G070900 not classified & original description: pacid=50575977... 0.04 OrthoFinder output from all 47 species
Ceric.19G071000.1 Ceric.19G071000 not classified & original description: pacid=50575763... 0.03 OrthoFinder output from all 47 species
Ceric.19G071200.1 Ceric.19G071200 not classified & original description: pacid=50575339... 0.03 OrthoFinder output from all 47 species
Ceric.19G071300.1 Ceric.19G071300 not classified & original description: pacid=50576608... 0.04 OrthoFinder output from all 47 species
Ceric.19G072100.1 Ceric.19G072100 not classified & original description: pacid=50575999... 0.03 OrthoFinder output from all 47 species
Dcu_g17234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029202001 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os10g37500.1 LOC_Os10g37500 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g26702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo407065 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc05g015060.4.1 Solyc05g015060 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g007280.4.1 BCS1, Solyc10g007280 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g30426 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003358_P001 AATP1, Zm00001e003358 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 24 121
IPR003959 ATPase_AAA_core 235 382
No external refs found!