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  5. Tin_g13372

Tin_g13372 (SET29, SDG29, ATX5)


Aliases : SET29, SDG29, ATX5

Description : class-III histone methyltransferase *(Trx) & original description: none


Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13372
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.05 OrthoFinder output from all 47 species
Ala_g11407 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ala_g11532 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Als_g16658 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Als_g29274 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aob_g29752 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ceric.01G107400.1 ATX4, SDG16,... class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ceric.32G012900.1 SDG25, ATXR7,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cre09.g395584 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g08323 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g09379 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01006875001 SDG25, ATXR7 Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038708001 ATX4, SDG16 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Len_g14720 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Len_g23260 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g38438 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Mp1g17790.1 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.06 OrthoFinder output from all 47 species
Ore_g05016 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Pp3c13_4470V3.1 SDG25, ATXR7, Pp3c13_4470 SET domain protein 25 0.01 OrthoFinder output from all 47 species
Ppi_g09508 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
Sam_g14051 No alias class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14555 No alias class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Smo164635 ATX3, SDG14 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Solyc01g006880.4.1 SDG25, ATXR7,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Solyc03g083410.3.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Spa_g55030 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1460 1566
IPR019787 Znf_PHD-finger 963 1017
IPR000313 PWWP_dom 780 877
No external refs found!