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  5. Tin_g13319

Tin_g13319 (VEL1, VIL2)


Aliases : VEL1, VIL2

Description : PRC2-VRN-interacTing factor (VIN3/VEL) of PRC2 histone methylation complex & original description: none


Gene families : OG0001143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13319

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene66156.t1 VEL1, VIL2,... PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.05 OrthoFinder output from all 47 species
Dcu_g35623 VEL1, VIL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009187001 VEL1, VIL2 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05310.2 VIL1, VRN5,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.03 OrthoFinder output from all 47 species
Msp_g11052 VIL1, VRN5 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Pir_g39067 VIL1, VRN5 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Ppi_g17715 VIL1, VRN5 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Spa_g51904 VEL1, VIL2 PRC2-VRN-interacting factor (VIN3/VEL) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
Zm00001e040024_P001 VEL1, VIL2,... PRC2-VRN-interacting PHD protein (VIN3|VRN5) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 269 387
No external refs found!