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  5. Tin_g13238

Tin_g13238 (SBE2.2)


Aliases : SBE2.2

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13238
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000981.14 SBE2.2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.19 SBE2.2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
MA_105471g0010 SBE2.2 1,4-alpha-glucan-branching enzyme 2-2,... 0.05 OrthoFinder output from all 47 species
Mp7g15230.1 SBE2.2 starch branching enzyme 0.04 OrthoFinder output from all 47 species
Solyc09g009190.4.1 SBE2.2, Solyc09g009190 starch branching enzyme 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 135 219
IPR006047 Glyco_hydro_13_cat_dom 306 373
IPR006048 A-amylase/branching_C 669 770
No external refs found!