1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g13188

Tin_g13188 (BTAF1, RGD3, CHA16,...)


Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16

Description : TATA box-binding protein-associated factor *(MOT1) & original description: none


Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00235730 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00236000 BTAF1, RGD3,... No description available 0.03 OrthoFinder output from all 47 species
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.03 OrthoFinder output from all 47 species
Adi_g086270 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Aev_g04198 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Ala_g12502 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
Als_g16472 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Dcu_g03219 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.06 OrthoFinder output from all 47 species
Dde_g14787 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.07 OrthoFinder output from all 47 species
Ehy_g09279 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01019359001 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.05 OrthoFinder output from all 47 species
Gb_19667 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.04 OrthoFinder output from all 47 species
Lfl_g35777 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
MA_10430482g0010 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.02 OrthoFinder output from all 47 species
Ore_g19191 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.05 OrthoFinder output from all 47 species
Ppi_g03292 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Sam_g29302 No alias TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Smo186944 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Solyc08g074520.2.1 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.03 OrthoFinder output from all 47 species
Spa_g08445 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 1462 1759
IPR022707 Mot1_central_dom 769 1225
IPR001650 Helicase_C 1815 1919
No external refs found!