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  5. Tin_g13136

Tin_g13136 (PFC1)


Aliases : PFC1

Description : rRNA adenosine dimethylase *(PFC) & original description: none


Gene families : OG0006692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13136
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g006669 PFC1 rRNA adenosine dimethylase *(PFC) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05363 PFC1 rRNA adenosine dimethylase *(PFC) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027529001 PFC1 RNA processing.RNA modification.rRNA/tRNA... 0.05 OrthoFinder output from all 47 species
LOC_Os02g03050.2 PFC1, LOC_Os02g03050 rRNA adenosine dimethylase (PFC) 0.03 OrthoFinder output from all 47 species
Lfl_g20981 PFC1 rRNA adenosine dimethylase *(PFC) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 71 339
No external refs found!