Tin_g12945

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g12945
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT3G13220	ABCG26, WBC27	ABC-2 type transporter family protein	0.03	OrthoFinder output from all 47 species
Aev_g05490	No alias	sporopollenin precursor exporter *(ABCG26) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene36520.t1	Aspi01Gene36520	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06567	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12680	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os08g07010.1	ABCG14, LOC_Os08g07010	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_65845g0010	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Nbi_g01338	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589	No alias	not classified & original description: CDS=22-1557	0.02	OrthoFinder output from all 47 species
Zm00001e009010_P001	ABCG25,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	534	743
IPR003439	ABC_transporter-like_ATP-bd	216	371
IPR043926	ABCG_dom	400	460

External Links

No external refs found!