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  5. Tin_g12796

Tin_g12796


Description : not classified & original description: none


Gene families : OG0004202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12796

Target Alias Description ECC score Gene Family Method Actions
Aop_g09704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G003100.1 Ceric.23G003100 not classified & original description: pacid=50610792... 0.03 OrthoFinder output from all 47 species
Lfl_g17624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_2296g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g03963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g073690.2.1 Solyc06g073690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011767_P002 Zm00001e011767 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 368 418
IPR024764 TFIIIC_Znf 801 891
IPR024761 TFIIIC_delta_N 97 233
No external refs found!