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  5. Tin_g12715

Tin_g12715


Description : histone demethylase *(PKDM8) & original description: none


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12715

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00096340 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.14 OrthoFinder output from all 47 species
Ala_g07158 No alias histone demethylase *(PKDM8) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33188 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04152 No alias histone demethylase *(PKDM8) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_21111 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 466 517
IPR003347 JmjC_dom 251 374
IPR003349 JmjN 75 107
No external refs found!