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  5. Tin_g12705

Tin_g12705 (ATVIIIA, VIIIA)


Aliases : ATVIIIA, VIIIA

Description : not classified & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12705

Target Alias Description ECC score Gene Family Method Actions
Cre09.g416250 ATVIIIA, VIIIA Myosin-1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre16.g658650 XIC, ATXIC Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
Mp8g04010.1 ATXIK, XI-17, XIK C3H zinc finger transcription factor. class XI myosin... 0.02 OrthoFinder output from all 47 species
Msp_g31802 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11836 ATVIIIA, VIIIA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06643 XIF, ATMYO5, ATXIF not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06967 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 889 907
IPR001609 Myosin_head_motor_dom 214 849
No external refs found!