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  5. Tin_g12588

Tin_g12588


Description : non-SNARE-type phytolongin & original description: none


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12588

Target Alias Description ECC score Gene Family Method Actions
Ala_g14986 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25521 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Aop_g01564 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14564 No alias non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0176.g056084 No alias non-SNARE-type phytolongin & original description: CDS=1-1422 0.06 OrthoFinder output from all 47 species
Cba_g29996 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G081100.1 Ceric.05G081100 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G056300.1 Ceric.25G056300 non-SNARE-type phytolongin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G046400.1 Ceric.37G046400 non-SNARE-type phytolongin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11962 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44291 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14668 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15032 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g01880.1 LOC_Os08g01880 non-SNARE-type phytolongin 0.04 OrthoFinder output from all 47 species
Msp_g27913 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00133 No alias non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04173 No alias non-SNARE-type phytolongin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000453 No alias non-SNARE-type phytolongin & original description: CDS=1-918 0.02 OrthoFinder output from all 47 species
Spa_g10247 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05441 No alias non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 44 99
No external refs found!