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  5. Tin_g12272

Tin_g12272 (ISE2, PDE317, EMB25)


Aliases : ISE2, PDE317, EMB25

Description : group-II intron splicing RNA helicase *(ISE2) & original description: none


Gene families : OG0004771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12272

Target Alias Description ECC score Gene Family Method Actions
Aop_g13240 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.02 OrthoFinder output from all 47 species
MA_10437000g0020 ISE2, PDE317, EMB25 DExH-box ATP-dependent RNA helicase DExH15 chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_1283g0010 ISE2, PDE317, EMB25 DExH-box ATP-dependent RNA helicase DExH15 chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp4g01470.1 ISE2, PDE317, EMB25 RNA helicase (ISE2) 0.03 OrthoFinder output from all 47 species
Nbi_g18791 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR012961 Ski2/MTR4_C 1035 1202
IPR011545 DEAD/DEAH_box_helicase_dom 192 344
No external refs found!