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  5. Tin_g12032

Tin_g12032


Description : not classified & original description: none


Gene families : OG0006058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12032

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00164p00040330 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Ala_g11819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0412.g068539 No alias not classified & original description: CDS=83-4372 0.04 OrthoFinder output from all 47 species
Dcu_g10975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g56000.1 LOC_Os01g56000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03490 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10431539g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g07560.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g07631 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g077940.4.1 Solyc04g077940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019718_P003 Zm00001e019718 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR012921 SPOC_C 1308 1433
IPR000504 RRM_dom 604 660
IPR000504 RRM_dom 936 1000
IPR000504 RRM_dom 785 848
No external refs found!