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  5. Tin_g11945

Tin_g11945


Description : component *(ZCCHC8) of Nuclear Exosome TargeTing (NEXT) activation complex & original description: none


Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11945

Target Alias Description ECC score Gene Family Method Actions
Als_g31352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13090 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.06 OrthoFinder output from all 47 species
Aspi01Gene28091.t1 Aspi01Gene28091 component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Ehy_g14866 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Nbi_g21419 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Ore_g38534 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Pnu_g20212 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Zm00001e022737_P001 Zm00001e022737 component ZCCHC8 of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 488 535
No external refs found!