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  5. Tin_g11880

Tin_g11880


Description : not classified & original description: none


Gene families : OG0016822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016822_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11880
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cba_g30020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31782 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 858 906
IPR002885 Pentatricopeptide_repeat 725 771
IPR002885 Pentatricopeptide_repeat 522 568
IPR002885 Pentatricopeptide_repeat 623 669
IPR002885 Pentatricopeptide_repeat 964 1010
IPR002885 Pentatricopeptide_repeat 496 520
IPR002885 Pentatricopeptide_repeat 826 856
IPR002885 Pentatricopeptide_repeat 221 251
IPR002885 Pentatricopeptide_repeat 395 422
IPR002885 Pentatricopeptide_repeat 322 352
IPR002885 Pentatricopeptide_repeat 1041 1064
IPR002885 Pentatricopeptide_repeat 423 453
No external refs found!