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  5. Tin_g11872

Tin_g11872


Description : not classified & original description: none


Gene families : OG0002203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11872
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Adi_g023979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23572 ATSUV3, EDA15 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G026000.1 Ceric.06G026000 not classified & original description: pacid=50619946... 0.03 OrthoFinder output from all 47 species
Ceric.11G056800.1 Ceric.11G056800 not classified & original description: pacid=50596860... 0.03 OrthoFinder output from all 47 species
Dac_g07377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011395001 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.02 OrthoFinder output from all 47 species
MA_185116g0020 No alias DExH-box ATP-dependent RNA helicase DExH18,... 0.02 OrthoFinder output from all 47 species
Nbi_g02331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g011460.2.1 Solyc11g011460 DExH-box ATP-dependent RNA helicase DExH18,... 0.02 OrthoFinder output from all 47 species
Zm00001e007912_P001 Zm00001e007912 ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR041082 Suv3_C_1 661 702
IPR022192 SUV3_C 724 771
IPR001650 Helicase_C 475 579
No external refs found!