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  5. Tin_g11870

Tin_g11870


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11870
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AT5G66631 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene03551.t1 Aspi01Gene03551 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14999.t1 Aspi01Gene14999 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21360.t1 Aspi01Gene21360 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G036200.1 Ceric.03G036200 not classified & original description: pacid=50571952... 0.02 OrthoFinder output from all 47 species
Dac_g33413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.05 OrthoFinder output from all 47 species
Len_g08870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06308 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g10079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033443 PPR_long 191 345
IPR002885 Pentatricopeptide_repeat 617 659
IPR002885 Pentatricopeptide_repeat 513 541
IPR002885 Pentatricopeptide_repeat 553 576
IPR002885 Pentatricopeptide_repeat 586 610
No external refs found!