AMTR_s00016p00207840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00016.178

Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG_01_0001710 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001710_tree ,
OG_02_0001098 (LandPlants) Phylogenetic Tree(s): OG_02_0001098_tree ,
OG_03_0001138 (SeedPlants) Phylogenetic Tree(s): OG_03_0001138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00016p00207840
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00135250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.07 Archaeplastida
AT2G01570 RGA, RGA1 GRAS family transcription factor family protein 0.03 Archaeplastida
GSVIVT01030735001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
LOC_Os05g49930.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.02 Archaeplastida
Smo139506 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
Solyc10g086380.1.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.04 Archaeplastida
Zm00001e012213_P001 No alias DELLA-type gibberellin signal transducer. transcription... 0.02 Archaeplastida
AMTR_s00122p00135250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 LandPlants
AT1G66350 RGL1, RGL RGA-like 1 0.02 LandPlants
AT2G01570 RGA, RGA1 GRAS family transcription factor family protein 0.03 LandPlants
GSVIVT01030735001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 LandPlants
LOC_Os05g49930.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.02 LandPlants
Pp3c19_8310V3.1 No alias GRAS family transcription factor family protein 0.01 LandPlants
Solyc10g086380.1.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.04 LandPlants
Zm00001e012213_P001 No alias DELLA-type gibberellin signal transducer. transcription... 0.02 LandPlants
AMTR_s00122p00135250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 SeedPlants
AT2G01570 RGA, RGA1 GRAS family transcription factor family protein 0.03 SeedPlants
GSVIVT01030735001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 SeedPlants
LOC_Os05g49930.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.01 SeedPlants
Solyc10g086380.1.1 No alias DELLA-type gibberellin signal transducer. transcription... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005202 TF_GRAS 18 161
No external refs found!