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  5. Smo424866

Smo424866 (PACid_15405288)


Aliases : PACid_15405288

Description : 33.99 development.unspecified isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. AUXIN-INDUCED IN ROOT CULTURES 9 (AIR9) INVOLVED IN: response to auxin stimulus, lateral root morphogenesis LOCATED IN: plasma membrane EXPRESSED IN: 23 plant structures EXPRESSED DURING: 13 growth stages BEST Arabidopsis thaliana protein match is: Outer arm dynein light chain 1 protein (TAIR:AT1G78230.1) Has 5746 Blast hits to 1796 proteins in 310 species: Archae - 0 Bacteria - 1053 Metazoa - 771 Fungi - 422 Plants - 290 Viruses - 42 Other Eukaryotes - 3168 (source: NCBI BLink). & (loc_os07g05470.1 : 851.0


Gene families : OG_01_0008393 (Gene family) Phylogenetic Tree(s): OG0008393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo424866
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G34680 AIR9 Outer arm dynein light chain 1 protein 0.02 Gene family
GSVIVT01021613001 No alias 33.99 development.unspecified isolated from differential... 0.04 Gene family
LOC_Os07g05470 Os07g0148800 17.2.3 hormone... 0.05 Gene family
MA_10437099g0010 No alias 17.2.3 hormone... 0.05 Gene family
Solyc02g070260.3.1 Solyc02g070260.3 33.99 development.unspecified isolated from differential... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 495 531
No external refs found!