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  5. Tin_g11650

Tin_g11650 (VSR2;2, ATVSR3, BP80-2;2, VSR3)


Aliases : VSR2;2, ATVSR3, BP80-2;2, VSR3

Description : lytic vacuole protein sorTing receptor *(VSR) & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11650
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00095230 VSR1;1, BP80,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 OrthoFinder output from all 47 species
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.03 OrthoFinder output from all 47 species
Als_g05625 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Cre02.g095111 VSR2;2, ATVSR3,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 OrthoFinder output from all 47 species
LOC_Os06g45380.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
Len_g04782 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Msp_g24105 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e037729_P002 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 73 163
No external refs found!