Tin_g11587 (PDR6, ATPDR6)

Aliases : PDR6, ATPDR6

Description : not classified & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g11587
Cluster	HCCA: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
AT1G66950	PDR11, ATPDR11	pleiotropic drug resistance 11	0.02	OrthoFinder output from all 47 species
AT4G15236	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	OrthoFinder output from all 47 species
Adi_g014210	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g27487	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18617	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g65335	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28061.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69802.t1	ATPDR3, PDR3,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10425791g0020	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
MA_10427683g0010	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Spa_g24438	PDR11, ATPDR11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g56833	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	13	126

External Links

No external refs found!