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  5. Tin_g11377

Tin_g11377 (SYT5, NTMC2T2.1,...)


Aliases : SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE

Description : not classified & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11377

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00207130 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aop_g11377 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020557.18 SYT5, NTMC2T2.1,... No description available 0.01 OrthoFinder output from all 47 species
MA_10433495g0010 NTMC2TYPE4, NTMC2T4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002484_P001 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 291 395
IPR039010 Synaptotagmin_SMP 97 277
No external refs found!