Tin_g11338

Description : not classified & original description: none

Gene families : OG0000111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g11338
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g053894	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g055350	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g069109	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g086392	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g31987	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g15408	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene27263.t1	Aspi01Gene27263	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g43442	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g30488	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g37056	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g37627	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03357	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041373	RT_RNaseH	2	49
IPR041588	Integrase_H2C2	153	210
IPR001584	Integrase_cat-core	232	326

External Links

No external refs found!