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  5. Tin_g11330

Tin_g11330


Description : not classified & original description: none


Gene families : OG0009011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11330
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
ATMG00090 No alias structural constituent of ribosome;protein binding 0.06 OrthoFinder output from all 47 species
Aev_g20617 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Ala_g25281 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Als_g05492 No alias not classified & original description: none 0.23 OrthoFinder output from all 47 species
Aob_g23054 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Aob_g29749 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Aop_g18051 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Cba_g33316 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ceric.23G029400.1 Ceric.23G029400 not classified & original description: pacid=50610062... 0.12 OrthoFinder output from all 47 species
Cre11.g467702 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g51885 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Gb_13807 No alias Ribosomal protein S3, mitochondrial OS=Zea mays... 0.06 OrthoFinder output from all 47 species
LOC_Os12g34054.1 LOC_Os12g34054 component mtRPS3 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
LOC_Os12g34124.1 LOC_Os12g34124 component mtRPS3 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g01174 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g38544 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Mp1g05170.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Nbi_g22008 No alias not classified & original description: none 0.19 OrthoFinder output from all 47 species
Pir_g61975 No alias not classified & original description: none 0.27 OrthoFinder output from all 47 species
Sam_g08984 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g02218 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 337 417
No external refs found!