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  5. Tin_g11209

Tin_g11209 (TSK, BRU1, MGO3)


Aliases : TSK, BRU1, MGO3

Description : chromaTin stabilizing factor *(TSK) & original description: none


Gene families : OG0009270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g11209
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G18730 TSK, BRU1, MGO3 tetratricopeptide repeat (TPR)-containing protein 0.04 OrthoFinder output from all 47 species
Aop_g05749 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.16 OrthoFinder output from all 47 species
Azfi_s0090.g042799 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original... 0.05 OrthoFinder output from all 47 species
Ceric.09G039700.1 TSK, BRU1, MGO3,... chromatin stabilizing factor *(TSK) & original... 0.09 OrthoFinder output from all 47 species
GSVIVT01026545001 TSK, BRU1, MGO3 Cell cycle.interphase.DNA replication.preinitiation.TSK... 0.07 OrthoFinder output from all 47 species
Gb_06807 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.07 OrthoFinder output from all 47 species
Len_g59655 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425879g0010 TSK, BRU1, MGO3 Protein TONSOKU OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10436754g0010 No alias Protein TONSOKU OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_37605g0010 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.02 OrthoFinder output from all 47 species
Mp6g14510.1 TSK, BRU1, MGO3 chromatin stabilizing factor (TSK) 0.09 OrthoFinder output from all 47 species
Nbi_g07608 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024740 TSK, BRU1, MGO3 chromatin stabilizing factor *(TSK) & original... 0.04 OrthoFinder output from all 47 species
Solyc11g005690.3.1 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.05 OrthoFinder output from all 47 species
Zm00001e023747_P002 TSK, BRU1, MGO3,... chromatin stabilizing factor (TSK) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 960 977
IPR013105 TPR_2 252 282
No external refs found!