Tin_g10717 (COPT5)

Aliases : COPT5

Description : copper transporter *(COPT) & original description: none

Gene families : OG0001223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g10717

Target	Alias	Description	ECC score	Gene Family Method
Ceric.13G063600.1	COPT5, Ceric.13G063600	copper transporter *(COPT) & original description:...	0.03	OrthoFinder output from all 47 species
Gb_20251	No alias	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species
Gb_28923	COPT5	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species
LOC_Os08g35490.1	COPT5, LOC_Os08g35490	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
LOC_Os09g26900.1	COPT5, LOC_Os09g26900	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
MA_10434905g0010	No alias	copper cation channel (COPT). copper transporter (COPT)	0.04	OrthoFinder output from all 47 species
Smo18456	COPT5	Nutrient uptake.copper uptake.reduction-based...	0.02	OrthoFinder output from all 47 species
Spa_g35878	COPT5	copper transporter *(COPT) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38847	COPT5	copper transporter *(COPT) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e008180_P001	COPT1, Zm00001e008180	copper cation channel (COPT). copper transporter (COPT)	0.02	OrthoFinder output from all 47 species
Zm00001e019694_P001	COPT1, Zm00001e019694	copper cation channel (COPT). copper transporter (COPT)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	IEA	Interproscan
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	19	151

External Links

No external refs found!

Tin_g10717 (COPT5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation