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  5. Tin_g10549

Tin_g10549


Description : regulatory protein *(ZC11A) of mRNA export & original description: none


Gene families : OG0001116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10549

Target Alias Description ECC score Gene Family Method Actions
Adi_g059322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35518 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Als_g62748 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Aop_g09712 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010117 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G028800.1 Ceric.21G028800 regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Len_g00716 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04961 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Nbi_g17064 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.05 OrthoFinder output from all 47 species
Pir_g30352 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Solyc04g008550.4.1 Solyc04g008550 C3H zinc finger transcription factor. regulatory... 0.03 OrthoFinder output from all 47 species
Spa_g17319 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Tin_g02840 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Zm00001e041908_P001 Zm00001e041908 C3H zinc finger transcription factor. regulatory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR041686 Znf-CCCH_3 7 64
IPR000571 Znf_CCCH 102 124
No external refs found!