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  5. Tin_g10529

Tin_g10529


Description : regulatory E3 ubiquiTin ligase (APD) involved in gametogenesis & original description: none


Gene families : OG0001688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g10529

Target Alias Description ECC score Gene Family Method Actions
Aob_g03435 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species
Cba_g06452 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species
Pir_g29913 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.03 OrthoFinder output from all 47 species
Ppi_g02996 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR032010 APD1-4_M 198 296
IPR032008 APD1-4_N 106 165
No external refs found!