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  5. Tin_g09777

Tin_g09777 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09777
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00138540 LOP1, TRN1,... Protein TORNADO 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g39266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52462 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33306.t1 Aspi01Gene33306 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24745 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR032171 COR 580 733
No external refs found!