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  5. Tin_g09742

Tin_g09742


Description : not classified & original description: none


Gene families : OG0005152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09742
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00182p00053870 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G51230 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
Aev_g38808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018782001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_14634 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g38415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g15450.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g14658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002472_P001 Zm00001e002472 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!