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  5. Tin_g09717

Tin_g09717


Description : histone *(H3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09717
Cluster HCCA: Cluster_19

title="View ECC pair as gra
Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G27360 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G10390 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G65360 No alias Histone superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26587 No alias histone *(H3) & original description: none 0.09 OrthoFinder output from all 47 species
Als_g61760 No alias histone H3 variant *(CENH3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33085 No alias histone *(H3) & original description: none 0.13 OrthoFinder output from all 47 species
Aop_g36137 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01931.t1 Aspi01Gene01931 histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42452.t1 Aspi01Gene42452 histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02423 No alias histone H3 variant *(CENH3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G049100.1 Ceric.22G049100 histone H3 variant *(CENH3) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G029000.1 Ceric.27G029000 histone *(H3) & original description: pacid=50605580... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.26 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre16.g648500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.01 OrthoFinder output from all 47 species
Dac_g04344 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g27747 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Gb_29026 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Gb_30564 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.03 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.05 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.03 OrthoFinder output from all 47 species
Len_g04468 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
MA_17527g0010 No alias histone (H3) 0.01 OrthoFinder output from all 47 species
Mp7g10730.1 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Mp7g18030.1 No alias histone (H3) 0.05 OrthoFinder output from all 47 species
Msp_g08229 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36081 No alias histone *(H3) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41988 No alias histone *(H3) & original description: none 0.1 OrthoFinder output from all 47 species
Pp3c24_13230V3.1 Pp3c24_13230 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22036 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.02 OrthoFinder output from all 47 species
Solyc01g086820.4.1 Solyc01g086820 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc01g095650.4.1 HTR12, CENH3,... histone H3 variant (CENH3) 0.03 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.02 OrthoFinder output from all 47 species
Spa_g04339 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33395 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42522 No alias histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g46951 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52464 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!