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  5. Tin_g09628

Tin_g09628 (SYP125, ATSYP125)


Aliases : SYP125, ATSYP125

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09628

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00241620 SYP132,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT3G11820 SYP121,... syntaxin of plants 121 0.01 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.02 OrthoFinder output from all 47 species
Aob_g01796 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene03950.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
MA_6119g0010 ATSYP124, SYP124 Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.04 OrthoFinder output from all 47 species
Msp_g25860 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012994 SYP121,... Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Smo130326 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 1 159
IPR000727 T_SNARE_dom 160 212
No external refs found!